Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.33■□□□□ 0.2
IFT43Q96FT9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.33■□□□□ 0.2
IFT43Q96FT9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AC138035.3-201ENST00000622706 2791 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AL353705.2-201ENST00000428243 662 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AL512638.1-201ENST00000457493 794 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 IGHV3-42-201ENST00000520410 361 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AP001282.1-201ENST00000531301 1499 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 AC018529.1-201ENST00000613063 361 ntBASIC16.32■□□□□ 0.2
IFT43Q96FT9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFT43Q96FT9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.32■□□□□ 0.2
IFT43Q96FT9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TSPY16P-201ENST00000449843 468 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TERF1P3-201ENST00000505638 1227 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 AC243562.2-201ENST00000561247 970 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 MIR4453-201ENST00000584019 89 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 AC007967.4-201ENST00000614700 386 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 MIR600HG-201ENST00000449175 5984 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms