Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 FAM220BP-201ENST00000377689 816 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 TFAMP1-201ENST00000412727 736 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 AC005829.1-201ENST00000570002 483 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 MIR3687-2-201ENST00000577708 61 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 MIR3687-1-201ENST00000614492 61 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 GRK6P1-201ENST00000400595 1711 ntBASIC14.2□□□□□ -0.14
PTP4A1Q93096 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTP4A1Q93096 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NORAD-201ENST00000565493 5339 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 KRT8P37-201ENST00000451609 1420 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 MIR346-201ENST00000362234 95 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AL645939.2-201ENST00000427340 991 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 RNA5SP410-201ENST00000516285 106 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AL135744.1-201ENST00000565098 629 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 AC092902.6-201ENST00000641783 218 ntBASIC14.19□□□□□ -0.14
PTP4A1Q93096 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTP4A1Q93096 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTP4A1Q93096 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms