Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 HLA-H-201ENST00000383620 1096 ntBASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC136604.1-201ENST00000418535 575 ntBASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AL022342.1-201ENST00000400363 863 ntBASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AP000842.3-202ENST00000569238 1080 ntBASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 AL607033.1-201ENST00000623900 1599 ntBASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
SLC44A1Q8WWI5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 RPL13AP23-201ENST00000480739 586 ntBASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 FAM86C2P-203ENST00000528684 1004 ntBASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AC243562.1-201ENST00000560672 389 ntBASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AC026979.3-201ENST00000607315 403 ntBASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AC091812.2-201ENST00000619081 385 ntBASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms