Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
HIPK4Q8NE63 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AL390755.1-201ENST00000623716 2027 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AC009090.5-201ENST00000624886 2285 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GRK6P1-201ENST00000400595 1711 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AC073648.2-201ENST00000510116 352 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MIR1199-201ENST00000621445 119 ntBASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIPK4Q8NE63 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 AC087386.2-201ENST00000623212 4637 ntBASIC15.4■□□□□ 0.06
HIPK4Q8NE63 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 U82695.1-201ENST00000635752 1889 ntBASIC15.4■□□□□ 0.06
HIPK4Q8NE63 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 RPS2P1-201ENST00000434010 821 ntBASIC15.4■□□□□ 0.06
HIPK4Q8NE63 DUSP5P1-201ENST00000441325 1139 ntBASIC15.4■□□□□ 0.06
HIPK4Q8NE63 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 IGHV3-65-201ENST00000523210 341 ntBASIC15.4■□□□□ 0.06
HIPK4Q8NE63 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms