Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC026691.1-201ENST00000602502 2017 ntBASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 AC091544.8-201ENST00000619490 361 ntBASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CFAP43Q8NDM7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 AC127383.1-201ENST00000444697 1800 ntBASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 RN7SL555P-201ENST00000584742 339 ntBASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CFAP43Q8NDM7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 AC013355.1-201ENST00000562625 723 ntBASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFAP43Q8NDM7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 EIF3FP3-201ENST00000434851 1086 ntBASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 SUPT4H1P2-201ENST00000501248 353 ntBASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 AP003171.2-201ENST00000528208 925 ntBASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 IQSEC3P1-201ENST00000538799 536 ntBASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFAP43Q8NDM7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 NDUFAB1P1-201ENST00000404262 460 ntBASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 AL133499.1-201ENST00000596207 608 ntBASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 PCDH8P1-201ENST00000428983 2773 ntBASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 KRT8P14-201ENST00000414254 1442 ntBASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC24.08■■□□□ 1.44
CFAP43Q8NDM7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC24.08■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms