Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC136604.1-201ENST00000418535 575 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 BX842568.4-201ENST00000421222 227 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC007967.4-201ENST00000614700 386 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC009093.7-201ENST00000623853 1223 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC023157.3-201ENST00000619086 2088 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 AC006486.2-201ENST00000624246 2199 ntBASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LSMEM1Q8N8F7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AL109954.1-202ENST00000564051 2148 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AC127383.1-201ENST00000444697 1800 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 SPDYE14P-201ENST00000442619 822 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AC010327.4-202ENST00000591484 748 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 PKD1P5-201ENST00000532415 10291 ntBASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LSMEM1Q8N8F7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LSMEM1Q8N8F7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms