Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 HAUS4P1-201ENST00000406739 1145 ntBASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AP006294.1-201ENST00000415407 339 ntBASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.69□□□□□ -0.06
BEST3Q8N1M1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BEST3Q8N1M1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 Z97205.2-201ENST00000564697 1639 ntBASIC14.68□□□□□ -0.06
BEST3Q8N1M1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 PAUPAR-201ENST00000630360 2965 ntBASIC14.68□□□□□ -0.06
BEST3Q8N1M1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.68□□□□□ -0.06
BEST3Q8N1M1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC006449.6-201ENST00000612330 2296 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 GK-202ENST00000378941 458 ntTSL 3 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC244107.1-201ENST00000442033 332 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 MYCLP2-201ENST00000449268 967 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 RN7SL752P-201ENST00000463779 287 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 MEIS3P1-201ENST00000495167 958 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC123567.1-201ENST00000548294 1261 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BEST3Q8N1M1 LINC01115-203ENST00000606068 577 ntBASIC14.67□□□□□ -0.06
BEST3Q8N1M1 AC099568.2-201ENST00000609194 695 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms