Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 AC112504.1-201ENST00000623415 1841 ntBASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 PRAL-201ENST00000624952 3286 ntBASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCN4BQ8IWT1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 RN7SL837P-201ENST00000463010 287 ntBASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 GIMAP3P-201ENST00000495150 836 ntBASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.59■□□□□ 0.25
SCN4BQ8IWT1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCN4BQ8IWT1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 GK-202ENST00000378941 458 ntTSL 3 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.58■□□□□ 0.24
SCN4BQ8IWT1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms