Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB43Q86YS6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB43Q86YS6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 U82695.1-201ENST00000635752 1889 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 SPDYE17-201ENST00000412399 783 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AC093004.1-201ENST00000508850 424 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AL512361.1-201ENST00000554200 418 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 AC104794.3-201ENST00000566840 1248 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 AL033527.5-202ENST00000641632 1098 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 MIR600HG-201ENST00000449175 5984 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 CU639417.3-201ENST00000624240 1404 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 FAM45BP-202ENST00000592932 1624 ntBASIC15.14■□□□□ 0.01
RAB43Q86YS6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB43Q86YS6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB43Q86YS6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 NME2P1-201ENST00000426182 414 ntBASIC15.13■□□□□ 0.01
RAB43Q86YS6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 SDHAP3-202ENST00000515467 728 ntBASIC15.13■□□□□ 0.01
RAB43Q86YS6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.13■□□□□ 0.01
RAB43Q86YS6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms