Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.23■□□□□ 0.67
CCDC93Q567U6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AL590640.2-201ENST00000457038 527 ntBASIC19.23■□□□□ 0.67
CCDC93Q567U6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 RNA5SP486-201ENST00000515961 83 ntBASIC19.23■□□□□ 0.67
CCDC93Q567U6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AC005915.1-201ENST00000624912 2018 ntBASIC19.23■□□□□ 0.67
CCDC93Q567U6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC93Q567U6 KRT8P35-201ENST00000483942 1338 ntBASIC19.23■□□□□ 0.67
CCDC93Q567U6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC93Q567U6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 UPF3AP2-201ENST00000457924 1132 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 HIST2H2BC-201ENST00000498492 580 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AL096828.3-201ENST00000615354 462 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 AC006453.4-201ENST00000636949 1252 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC93Q567U6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 PCDHA1-201ENST00000378133 2726 ntBASIC19.22■□□□□ 0.67
CCDC93Q567U6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC93Q567U6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC93Q567U6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC93Q567U6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC93Q567U6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC93Q567U6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC93Q567U6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC93Q567U6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CCDC93Q567U6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC93Q567U6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms