Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 KRT8P4-201ENST00000509735 1454 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 AC018695.7-201ENST00000624587 2492 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 CHMP1AP1-201ENST00000445563 662 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 AC100850.1-201ENST00000506768 649 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.28■□□□□ 0.68
DDR1Q08345 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.28■□□□□ 0.68
DDR1Q08345 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.28■□□□□ 0.68
DDR1Q08345 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDR1Q08345 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DDR1Q08345 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.28■□□□□ 0.68
DDR1Q08345 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
DDR1Q08345 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.28■□□□□ 0.68
DDR1Q08345 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDR1Q08345 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDR1Q08345 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.27■□□□□ 0.68
DDR1Q08345 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.27■□□□□ 0.68
DDR1Q08345 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDR1Q08345 AL354877.1-201ENST00000424412 413 ntBASIC19.27■□□□□ 0.68
DDR1Q08345 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDR1Q08345 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.27■□□□□ 0.68
DDR1Q08345 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.27■□□□□ 0.68
DDR1Q08345 MAGEA5-201ENST00000446757 942 ntBASIC19.27■□□□□ 0.68
DDR1Q08345 EEF1DP6-201ENST00000449232 372 ntBASIC19.27■□□□□ 0.68
DDR1Q08345 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.27■□□□□ 0.68
DDR1Q08345 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.27■□□□□ 0.68
DDR1Q08345 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.27■□□□□ 0.68
DDR1Q08345 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.27■□□□□ 0.68
DDR1Q08345 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDR1Q08345 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.27■□□□□ 0.68
DDR1Q08345 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDR1Q08345 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDR1Q08345 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDR1Q08345 FLJ38576-201ENST00000623820 2459 ntBASIC19.27■□□□□ 0.67
DDR1Q08345 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.27■□□□□ 0.67
DDR1Q08345 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDR1Q08345 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
DDR1Q08345 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DDR1Q08345 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 DPM3-202ENST00000368399 517 ntBASIC19.26■□□□□ 0.67
DDR1Q08345 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.26■□□□□ 0.67
DDR1Q08345 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.26■□□□□ 0.67
DDR1Q08345 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 AC069218.1-201ENST00000435269 762 ntBASIC19.26■□□□□ 0.67
DDR1Q08345 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.26■□□□□ 0.67
DDR1Q08345 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.26■□□□□ 0.67
DDR1Q08345 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.26■□□□□ 0.67
DDR1Q08345 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 ZACNP1-201ENST00000612259 710 ntBASIC19.26■□□□□ 0.67
DDR1Q08345 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 AC091544.8-201ENST00000619490 361 ntBASIC19.26■□□□□ 0.67
DDR1Q08345 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
DDR1Q08345 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.26■□□□□ 0.67
DDR1Q08345 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDR1Q08345 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms