Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SRP54P61011 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SRP54P61011 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SRP54P61011 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SRP54P61011 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.57■□□□□ 0.08
SRP54P61011 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SRP54P61011 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 AC136604.1-201ENST00000418535 575 ntBASIC15.57■□□□□ 0.08
SRP54P61011 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.57■□□□□ 0.08
SRP54P61011 HNRNPUP1-201ENST00000554987 333 ntBASIC15.57■□□□□ 0.08
SRP54P61011 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 AL391069.4-201ENST00000609583 481 ntBASIC15.57■□□□□ 0.08
SRP54P61011 WFDC1-204ENST00000613603 549 ntBASIC15.57■□□□□ 0.08
SRP54P61011 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.57■□□□□ 0.08
SRP54P61011 AL136379.1-201ENST00000623471 2642 ntBASIC15.57■□□□□ 0.08
SRP54P61011 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 AL662844.4-201ENST00000606367 2838 ntBASIC15.57■□□□□ 0.08
SRP54P61011 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 CDC14C-201ENST00000428251 1719 ntBASIC15.57■□□□□ 0.08
SRP54P61011 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.57■□□□□ 0.08
SRP54P61011 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRP54P61011 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SRP54P61011 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.56■□□□□ 0.08
SRP54P61011 AL596087.1-201ENST00000400979 1969 ntBASIC15.56■□□□□ 0.08
SRP54P61011 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.56■□□□□ 0.08
SRP54P61011 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SRP54P61011 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SRP54P61011 DOC2GP-204ENST00000639052 2548 ntBASIC15.56■□□□□ 0.08
SRP54P61011 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.56■□□□□ 0.08
SRP54P61011 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SRP54P61011 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRP54P61011 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 KRT18P64-201ENST00000434946 1219 ntBASIC15.56■□□□□ 0.08
SRP54P61011 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.56■□□□□ 0.08
SRP54P61011 RN7SL837P-201ENST00000463010 287 ntBASIC15.56■□□□□ 0.08
SRP54P61011 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.56■□□□□ 0.08
SRP54P61011 SLED1-202ENST00000512051 380 ntBASIC15.56■□□□□ 0.08
SRP54P61011 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.56■□□□□ 0.08
SRP54P61011 AC092552.1-201ENST00000547243 906 ntBASIC15.56■□□□□ 0.08
SRP54P61011 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.56■□□□□ 0.08
SRP54P61011 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 277.3 ms