Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SPCS3P61009 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SPCS3P61009 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 HNRNPDP1-201ENST00000439535 754 ntBASIC12.93□□□□□ -0.34
SPCS3P61009 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 AC108751.1-201ENST00000490852 363 ntBASIC12.93□□□□□ -0.34
SPCS3P61009 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.93□□□□□ -0.34
SPCS3P61009 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.93□□□□□ -0.34
SPCS3P61009 AC117500.6-201ENST00000624871 588 ntBASIC12.93□□□□□ -0.34
SPCS3P61009 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.93□□□□□ -0.34
SPCS3P61009 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPCS3P61009 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.93□□□□□ -0.34
SPCS3P61009 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 PMS2P7-201ENST00000506558 1336 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 AC090616.6-203ENST00000579186 1945 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 AC092474.2-201ENST00000424288 719 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 KRT18P67-201ENST00000432816 1264 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 VN2R19P-201ENST00000442399 1052 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
SPCS3P61009 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.92□□□□□ -0.34
SPCS3P61009 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.92□□□□□ -0.34
SPCS3P61009 AC002347.1-201ENST00000569543 541 ntBASIC12.92□□□□□ -0.34
SPCS3P61009 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.92□□□□□ -0.34
SPCS3P61009 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SPCS3P61009 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPCS3P61009 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms