Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S2P59780 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S2P59780 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
AP3S2P59780 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
AP3S2P59780 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S2P59780 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S2P59780 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S2P59780 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AC127383.1-201ENST00000444697 1800 ntBASIC13.6□□□□□ -0.23
AP3S2P59780 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S2P59780 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.6□□□□□ -0.23
AP3S2P59780 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
AP3S2P59780 BX005266.1-201ENST00000473402 457 ntBASIC13.6□□□□□ -0.23
AP3S2P59780 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S2P59780 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
AP3S2P59780 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S2P59780 AC091076.1-201ENST00000610741 619 ntBASIC13.6□□□□□ -0.23
AP3S2P59780 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
AP3S2P59780 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S2P59780 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S2P59780 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S2P59780 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
AP3S2P59780 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
AP3S2P59780 AC009090.5-201ENST00000624886 2285 ntBASIC13.6□□□□□ -0.23
AP3S2P59780 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S2P59780 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 NSUN5P1-202ENST00000421140 1535 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 NSUN5P2-203ENST00000457352 1529 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 INTS4P1-203ENST00000641008 3683 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 AC117489.1-201ENST00000625169 3217 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 AC005252.3-201ENST00000623855 2258 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 AC113347.1-201ENST00000413321 391 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 KRT17P6-201ENST00000453795 1220 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 BX276092.5-203ENST00000456199 560 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S2P59780 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.59□□□□□ -0.23
AP3S2P59780 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.59□□□□□ -0.23
AP3S2P59780 AL121672.3-201ENST00000608644 468 ntBASIC13.59□□□□□ -0.23
AP3S2P59780 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S2P59780 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
AP3S2P59780 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms