Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.42■□□□□ 0.54
RHBDL3P58872 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.42■□□□□ 0.54
RHBDL3P58872 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.42■□□□□ 0.54
RHBDL3P58872 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RHBDL3P58872 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
RHBDL3P58872 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.42■□□□□ 0.54
RHBDL3P58872 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 AC132938.4-201ENST00000623835 848 ntBASIC18.42■□□□□ 0.54
RHBDL3P58872 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.42■□□□□ 0.54
RHBDL3P58872 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RHBDL3P58872 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RHBDL3P58872 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RHBDL3P58872 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AC090340.1-201ENST00000620778 4980 ntBASIC18.41■□□□□ 0.54
RHBDL3P58872 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 YBX1P6-201ENST00000442962 1002 ntBASIC18.41■□□□□ 0.54
RHBDL3P58872 RPL13AP20-201ENST00000459725 609 ntBASIC18.41■□□□□ 0.54
RHBDL3P58872 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.41■□□□□ 0.54
RHBDL3P58872 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.41■□□□□ 0.54
RHBDL3P58872 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.41■□□□□ 0.54
RHBDL3P58872 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.41■□□□□ 0.54
RHBDL3P58872 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.41■□□□□ 0.54
RHBDL3P58872 AC007787.1-201ENST00000588095 1583 ntBASIC18.41■□□□□ 0.54
RHBDL3P58872 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RHBDL3P58872 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RHBDL3P58872 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.4■□□□□ 0.54
RHBDL3P58872 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.4■□□□□ 0.54
RHBDL3P58872 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RHBDL3P58872 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
RHBDL3P58872 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.4■□□□□ 0.54
RHBDL3P58872 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.4■□□□□ 0.54
RHBDL3P58872 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 AC114812.1-204ENST00000449669 728 ntBASIC18.4■□□□□ 0.54
RHBDL3P58872 AL590640.2-201ENST00000457038 527 ntBASIC18.4■□□□□ 0.54
RHBDL3P58872 AC108725.1-201ENST00000495472 409 ntBASIC18.4■□□□□ 0.54
RHBDL3P58872 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.4■□□□□ 0.54
RHBDL3P58872 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.4■□□□□ 0.54
RHBDL3P58872 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.4■□□□□ 0.54
RHBDL3P58872 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.4■□□□□ 0.54
RHBDL3P58872 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.4■□□□□ 0.54
RHBDL3P58872 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.4■□□□□ 0.54
RHBDL3P58872 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RHBDL3P58872 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RHBDL3P58872 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RHBDL3P58872 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RHBDL3P58872 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RHBDL3P58872 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RHBDL3P58872 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RHBDL3P58872 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RHBDL3P58872 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RHBDL3P58872 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RHBDL3P58872 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.39■□□□□ 0.53
RHBDL3P58872 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RHBDL3P58872 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms