Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.52■□□□□ 0.07
CLDN2P57739 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN2P57739 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 AC069224.1-201ENST00000566372 1715 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 DOC2GP-204ENST00000639052 2548 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 KRT43P-201ENST00000434019 910 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 KRT223P-202ENST00000449164 1292 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CLDN2P57739 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 AC000095.1-201ENST00000603208 874 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 AC133552.6-201ENST00000613406 534 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 COX11-210ENST00000639671 696 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 MSTO2P-201ENST00000314835 1709 ntBASIC15.51■□□□□ 0.07
CLDN2P57739 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN2P57739 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN2P57739 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN2P57739 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN2P57739 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.5■□□□□ 0.07
CLDN2P57739 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN2P57739 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN2P57739 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN2P57739 AC104989.1-201ENST00000519711 778 ntBASIC15.5■□□□□ 0.07
CLDN2P57739 ENPP7P5-201ENST00000541031 1031 ntBASIC15.5■□□□□ 0.07
CLDN2P57739 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN2P57739 CLUHP6-201ENST00000580789 941 ntBASIC15.5■□□□□ 0.07
CLDN2P57739 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN2P57739 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN2P57739 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLDN2P57739 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN2P57739 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN2P57739 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN2P57739 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN2P57739 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN2P57739 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN2P57739 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN2P57739 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN2P57739 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms