Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
UBE2AP49459 HAUS4P1-201ENST00000406739 1145 ntBASIC10.09□□□□□ -0.79
UBE2AP49459 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 PRYP6-201ENST00000514804 343 ntBASIC10.09□□□□□ -0.79
UBE2AP49459 RNA5SP419-201ENST00000515908 135 ntBASIC10.09□□□□□ -0.79
UBE2AP49459 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
UBE2AP49459 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.09□□□□□ -0.79
UBE2AP49459 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.09□□□□□ -0.79
UBE2AP49459 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
UBE2AP49459 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2AP49459 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
UBE2AP49459 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2AP49459 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2AP49459 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.08□□□□□ -0.8
UBE2AP49459 AC092919.2-201ENST00000623631 1645 ntBASIC10.08□□□□□ -0.8
UBE2AP49459 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
UBE2AP49459 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
UBE2AP49459 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 MIR940-201ENST00000401276 94 ntBASIC10.08□□□□□ -0.8
UBE2AP49459 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.08□□□□□ -0.8
UBE2AP49459 KRT18P3-201ENST00000451602 1288 ntBASIC10.08□□□□□ -0.8
UBE2AP49459 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.08□□□□□ -0.8
UBE2AP49459 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.08□□□□□ -0.8
UBE2AP49459 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 AC034105.1-201ENST00000563488 319 ntBASIC10.08□□□□□ -0.8
UBE2AP49459 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms