Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL12P48061 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CXCL12P48061 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL12P48061 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCL12P48061 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
CXCL12P48061 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.52■□□□□ 0.08
CXCL12P48061 SPCS2P2-201ENST00000603270 608 ntBASIC15.52■□□□□ 0.08
CXCL12P48061 U62317.3-201ENST00000608319 855 ntBASIC15.52■□□□□ 0.08
CXCL12P48061 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.52■□□□□ 0.08
CXCL12P48061 ENPP7P14-201ENST00000621765 1040 ntBASIC15.52■□□□□ 0.08
CXCL12P48061 AC128714.1-201ENST00000637035 887 ntBASIC15.52■□□□□ 0.08
CXCL12P48061 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL12P48061 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCL12P48061 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
CXCL12P48061 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL12P48061 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL12P48061 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL12P48061 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCL12P48061 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCL12P48061 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCL12P48061 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCL12P48061 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCL12P48061 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCL12P48061 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CXCL12P48061 LDHBP1-201ENST00000455730 1119 ntBASIC15.51■□□□□ 0.07
CXCL12P48061 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.51■□□□□ 0.07
CXCL12P48061 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.51■□□□□ 0.07
CXCL12P48061 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CXCL12P48061 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.51■□□□□ 0.07
CXCL12P48061 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCL12P48061 AL353726.2-201ENST00000623259 884 ntBASIC15.51■□□□□ 0.07
CXCL12P48061 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCL12P48061 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CXCL12P48061 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL12P48061 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 AL645608.8-201ENST00000606034 2086 ntBASIC15.5■□□□□ 0.07
CXCL12P48061 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CXCL12P48061 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 AC148477.4-201ENST00000613430 1793 ntBASIC15.5■□□□□ 0.07
CXCL12P48061 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CXCL12P48061 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL12P48061 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL12P48061 SPTLC1P5-201ENST00000450718 252 ntBASIC15.5■□□□□ 0.07
CXCL12P48061 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL12P48061 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.5■□□□□ 0.07
CXCL12P48061 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL12P48061 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.5■□□□□ 0.07
CXCL12P48061 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL12P48061 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL12P48061 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CXCL12P48061 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL12P48061 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CXCL12P48061 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL12P48061 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms