Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RFC4P35249 ENPP7P14-201ENST00000621765 1040 ntBASIC19.58■□□□□ 0.72
RFC4P35249 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
RFC4P35249 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
RFC4P35249 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC4P35249 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
RFC4P35249 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
RFC4P35249 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 AC006449.6-201ENST00000612330 2296 ntBASIC19.57■□□□□ 0.72
RFC4P35249 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RFC4P35249 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.57■□□□□ 0.72
RFC4P35249 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RFC4P35249 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RFC4P35249 AP001505.2-201ENST00000616815 443 ntBASIC19.57■□□□□ 0.72
RFC4P35249 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.57■□□□□ 0.72
RFC4P35249 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC4P35249 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC4P35249 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC4P35249 AC011477.6-201ENST00000604980 1927 ntBASIC19.57■□□□□ 0.72
RFC4P35249 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC4P35249 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RFC4P35249 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RFC4P35249 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.56■□□□□ 0.72
RFC4P35249 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.56■□□□□ 0.72
RFC4P35249 FAM8A4P-201ENST00000435433 1213 ntBASIC19.56■□□□□ 0.72
RFC4P35249 SERPINA13P-202ENST00000478994 924 ntBASIC19.56■□□□□ 0.72
RFC4P35249 TMEM198B-204ENST00000484016 896 ntBASIC19.56■□□□□ 0.72
RFC4P35249 RN7SL720P-201ENST00000488178 304 ntBASIC19.56■□□□□ 0.72
RFC4P35249 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.56■□□□□ 0.72
RFC4P35249 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC4P35249 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC4P35249 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RFC4P35249 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RFC4P35249 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 AC026471.1-201ENST00000564629 3026 ntBASIC19.56■□□□□ 0.72
RFC4P35249 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC4P35249 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.55■□□□□ 0.72
RFC4P35249 AC106886.4-201ENST00000623557 2502 ntBASIC19.55■□□□□ 0.72
RFC4P35249 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 AC091046.1-201ENST00000331871 207 ntBASIC19.55■□□□□ 0.72
RFC4P35249 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RFC4P35249 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.55■□□□□ 0.72
RFC4P35249 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC4P35249 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms