Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 AL442647.2-201ENST00000429864 857 ntBASIC16.11■□□□□ 0.17
SLC6A4P31645 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC6A4P31645 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 VDAC1P7-201ENST00000462417 847 ntBASIC16.11■□□□□ 0.17
SLC6A4P31645 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A4P31645 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC6A4P31645 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC6A4P31645 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC6A4P31645 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A4P31645 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A4P31645 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC6A4P31645 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC6A4P31645 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC6A4P31645 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC6A4P31645 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 AL512384.1-201ENST00000406683 331 ntBASIC16.1■□□□□ 0.17
SLC6A4P31645 KRT17P7-201ENST00000451704 1104 ntBASIC16.1■□□□□ 0.17
SLC6A4P31645 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC6A4P31645 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 RPSAP52-203ENST00000622976 1023 ntBASIC16.1■□□□□ 0.17
SLC6A4P31645 AL033527.5-201ENST00000641382 801 ntBASIC16.1■□□□□ 0.17
SLC6A4P31645 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A4P31645 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A4P31645 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SLC6A4P31645 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 INTS4P2-202ENST00000614726 2019 ntBASIC16.09■□□□□ 0.17
SLC6A4P31645 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A4P31645 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A4P31645 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 AC244107.1-201ENST00000442033 332 ntBASIC16.09■□□□□ 0.17
SLC6A4P31645 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A4P31645 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 AC011495.1-201ENST00000498085 584 ntBASIC16.09■□□□□ 0.17
SLC6A4P31645 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC6A4P31645 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC6A4P31645 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC6A4P31645 AC124283.3-201ENST00000570869 594 ntBASIC16.09■□□□□ 0.17
SLC6A4P31645 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC6A4P31645 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC6A4P31645 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A4P31645 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A4P31645 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms