Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA1P29973 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA1P29973 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA1P29973 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.91■□□□□ 0.46
CNGA1P29973 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.91■□□□□ 0.46
CNGA1P29973 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
CNGA1P29973 BAATP1-201ENST00000412284 1225 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 AC074338.1-201ENST00000416825 156 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.91■□□□□ 0.46
CNGA1P29973 AP000812.2-201ENST00000538934 718 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 AC009486.1-201ENST00000569860 813 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 AC124283.3-201ENST00000570869 594 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 AL049840.4-201ENST00000602422 811 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.91■□□□□ 0.46
CNGA1P29973 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.91■□□□□ 0.46
CNGA1P29973 AC009542.2-202ENST00000619004 1067 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.91■□□□□ 0.46
CNGA1P29973 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 AC134312.5-201ENST00000568031 1313 ntBASIC17.91■□□□□ 0.46
CNGA1P29973 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA1P29973 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.91■□□□□ 0.46
CNGA1P29973 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 FER1L4-210ENST00000615531 5998 ntBASIC17.9■□□□□ 0.46
CNGA1P29973 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.9■□□□□ 0.46
CNGA1P29973 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
CNGA1P29973 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CNGA1P29973 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CNGA1P29973 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 GOLGA2P4-201ENST00000441462 777 ntBASIC17.9■□□□□ 0.46
CNGA1P29973 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.9■□□□□ 0.46
CNGA1P29973 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.9■□□□□ 0.46
CNGA1P29973 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.9■□□□□ 0.46
CNGA1P29973 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CNGA1P29973 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNGA1P29973 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNGA1P29973 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNGA1P29973 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.89■□□□□ 0.45
CNGA1P29973 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNGA1P29973 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNGA1P29973 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNGA1P29973 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNGA1P29973 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNGA1P29973 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.89■□□□□ 0.45
CNGA1P29973 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNGA1P29973 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CNGA1P29973 KRT18P64-201ENST00000434946 1219 ntBASIC17.89■□□□□ 0.45
CNGA1P29973 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.89■□□□□ 0.45
CNGA1P29973 RPL13AP20-201ENST00000459725 609 ntBASIC17.89■□□□□ 0.45
CNGA1P29973 VDAC1P7-201ENST00000462417 847 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms