Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GABRB3P28472 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 AL512356.2-201ENST00000546955 174 ntBASIC15.65■□□□□ 0.1
GABRB3P28472 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
GABRB3P28472 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GABRB3P28472 MIR6080-201ENST00000617359 66 ntBASIC15.65■□□□□ 0.1
GABRB3P28472 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GABRB3P28472 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
GABRB3P28472 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GABRB3P28472 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.64■□□□□ 0.1
GABRB3P28472 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GABRB3P28472 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.64■□□□□ 0.09
GABRB3P28472 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GABRB3P28472 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.64■□□□□ 0.09
GABRB3P28472 AC254562.1-201ENST00000417586 456 ntBASIC15.64■□□□□ 0.09
GABRB3P28472 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 AP006288.1-201ENST00000446065 395 ntBASIC15.64■□□□□ 0.09
GABRB3P28472 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.64■□□□□ 0.09
GABRB3P28472 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.64■□□□□ 0.09
GABRB3P28472 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.64■□□□□ 0.09
GABRB3P28472 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.64■□□□□ 0.09
GABRB3P28472 AC134684.3-201ENST00000641758 218 ntBASIC15.64■□□□□ 0.09
GABRB3P28472 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
GABRB3P28472 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.64■□□□□ 0.09
GABRB3P28472 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GABRB3P28472 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.63■□□□□ 0.09
GABRB3P28472 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.63■□□□□ 0.09
GABRB3P28472 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.63■□□□□ 0.09
GABRB3P28472 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GABRB3P28472 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GABRB3P28472 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms