Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFRSF1BP20333 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFRSF1BP20333 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TNFRSF1BP20333 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.7□□□□□ -0.06
TNFRSF1BP20333 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 TFAMP1-201ENST00000412727 736 ntBASIC14.69□□□□□ -0.06
TNFRSF1BP20333 AL671277.1-201ENST00000429656 993 ntBASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 AC148477.4-201ENST00000613430 1793 ntBASIC14.69□□□□□ -0.06
TNFRSF1BP20333 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.69□□□□□ -0.06
TNFRSF1BP20333 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC004987.2-201ENST00000395959 1148 ntBASIC14.68□□□□□ -0.06
TNFRSF1BP20333 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC140113.2-201ENST00000604370 208 ntBASIC14.68□□□□□ -0.06
TNFRSF1BP20333 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC008267.7-201ENST00000624570 1194 ntBASIC14.68□□□□□ -0.06
TNFRSF1BP20333 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 CYP4F24P-201ENST00000586049 1580 ntBASIC14.68□□□□□ -0.06
TNFRSF1BP20333 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms