Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.55■□□□□ 0.4
COL11A1P12107 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.55■□□□□ 0.4
COL11A1P12107 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL11A1P12107 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL11A1P12107 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 AC055811.4-201ENST00000624039 1754 ntBASIC17.54■□□□□ 0.4
COL11A1P12107 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.54■□□□□ 0.4
COL11A1P12107 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.54■□□□□ 0.4
COL11A1P12107 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
COL11A1P12107 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL11A1P12107 AC091271.1-201ENST00000611877 1162 ntBASIC17.54■□□□□ 0.4
COL11A1P12107 ZACNP1-201ENST00000612259 710 ntBASIC17.54■□□□□ 0.4
COL11A1P12107 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL11A1P12107 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 CLUHP2-201ENST00000426660 1303 ntBASIC17.54■□□□□ 0.4
COL11A1P12107 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.54■□□□□ 0.4
COL11A1P12107 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.54■□□□□ 0.4
COL11A1P12107 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.54■□□□□ 0.4
COL11A1P12107 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.54■□□□□ 0.4
COL11A1P12107 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL11A1P12107 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 AC105250.1-201ENST00000509378 2057 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL11A1P12107 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
COL11A1P12107 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL11A1P12107 RPL5P21-201ENST00000404620 815 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.53■□□□□ 0.4
COL11A1P12107 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.53■□□□□ 0.4
COL11A1P12107 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 HIST2H2BB-201ENST00000449108 381 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 SERPINA13P-202ENST00000478994 924 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 SCARNA20.5-201ENST00000516991 142 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 AC044849.1-201ENST00000519737 1188 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.53■□□□□ 0.4
COL11A1P12107 MIR4783-201ENST00000580343 82 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.53■□□□□ 0.4
COL11A1P12107 AL022328.3-201ENST00000607943 679 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 AC097724.1-201ENST00000609581 426 ntBASIC17.53■□□□□ 0.4
COL11A1P12107 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
COL11A1P12107 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms