Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UBCP0CG48 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.9□□□□□ -0.18
UBCP0CG48 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 RPS8P6-201ENST00000426177 609 ntBASIC13.9□□□□□ -0.18
UBCP0CG48 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.9□□□□□ -0.18
UBCP0CG48 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.9□□□□□ -0.18
UBCP0CG48 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.9□□□□□ -0.18
UBCP0CG48 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 C18orf15-201ENST00000623680 2534 ntBASIC13.9□□□□□ -0.18
UBCP0CG48 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.9□□□□□ -0.18
UBCP0CG48 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBCP0CG48 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.9□□□□□ -0.18
UBCP0CG48 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.9□□□□□ -0.18
UBCP0CG48 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
UBCP0CG48 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.9□□□□□ -0.19
UBCP0CG48 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
UBCP0CG48 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
UBCP0CG48 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
UBCP0CG48 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
UBCP0CG48 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 C8orf49-201ENST00000525043 1968 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AC112693.3-201ENST00000624819 1983 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
UBCP0CG48 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.89□□□□□ -0.19
UBCP0CG48 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 KRT18P2-201ENST00000447938 1258 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.89□□□□□ -0.19
UBCP0CG48 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 RN7SL589P-201ENST00000481268 310 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 RNA5SP410-201ENST00000516285 106 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 RNA5SP416-201ENST00000516838 111 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.89□□□□□ -0.19
UBCP0CG48 KRT126P-201ENST00000549467 1181 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.89□□□□□ -0.19
UBCP0CG48 AL138918.1-201ENST00000568306 659 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 AC008267.7-201ENST00000624570 1194 ntBASIC13.89□□□□□ -0.19
UBCP0CG48 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.89□□□□□ -0.19
UBCP0CG48 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
UBCP0CG48 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBCP0CG48 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms