Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 AC007326.2-201ENST00000624224 7579 ntBASIC17.14■□□□□ 0.33
CCDC172P0C7W6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC172P0C7W6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MYO15B-237ENST00000642007 4893 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AC023157.3-201ENST00000619086 2088 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MIR940-201ENST00000401276 94 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AL450472.2-201ENST00000603663 1156 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AC084121.4-201ENST00000641598 221 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AF228730.8-201ENST00000642140 221 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 AC013268.4-201ENST00000637413 2228 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
CCDC172P0C7W6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC172P0C7W6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.12■□□□□ 0.33
CCDC172P0C7W6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 KRT8P48-201ENST00000515599 1220 ntBASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC055717.3-201ENST00000622967 595 ntBASIC17.12■□□□□ 0.33
CCDC172P0C7W6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC172P0C7W6 AC090616.6-203ENST00000579186 1945 ntBASIC17.11■□□□□ 0.33
CCDC172P0C7W6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms