Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HOXC6P09630 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXC6P09630 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXC6P09630 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
HOXC6P09630 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 AL662844.4-201ENST00000606367 2838 ntBASIC17.64■□□□□ 0.41
HOXC6P09630 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 MIR648-201ENST00000385046 94 ntBASIC17.64■□□□□ 0.41
HOXC6P09630 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 MTX1P1-201ENST00000440904 838 ntBASIC17.64■□□□□ 0.41
HOXC6P09630 IGHJ2P-201ENST00000454480 60 ntBASIC17.64■□□□□ 0.41
HOXC6P09630 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC6P09630 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC6P09630 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 SCARNA20.5-201ENST00000516991 142 ntBASIC17.64■□□□□ 0.41
HOXC6P09630 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC6P09630 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC6P09630 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC6P09630 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HOXC6P09630 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXC6P09630 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC6P09630 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC6P09630 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HOXC6P09630 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC6P09630 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC6P09630 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXC6P09630 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXC6P09630 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
HOXC6P09630 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HOXC6P09630 AL590640.2-201ENST00000457038 527 ntBASIC17.63■□□□□ 0.41
HOXC6P09630 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC6P09630 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 RN7SL48P-201ENST00000579283 293 ntBASIC17.63■□□□□ 0.41
HOXC6P09630 AC104982.3-201ENST00000581995 514 ntBASIC17.63■□□□□ 0.41
HOXC6P09630 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC6P09630 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC6P09630 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXC6P09630 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HOXC6P09630 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC6P09630 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC6P09630 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HOXC6P09630 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC6P09630 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HOXC6P09630 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.62■□□□□ 0.41
HOXC6P09630 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC6P09630 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC6P09630 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC6P09630 AC079328.2-201ENST00000561241 3354 ntBASIC17.62■□□□□ 0.41
HOXC6P09630 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms