Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.52■□□□□ 0.24
RB1P06400 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 AC018735.1-201ENST00000437208 1502 ntBASIC16.52■□□□□ 0.24
RB1P06400 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RB1P06400 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.52■□□□□ 0.24
RB1P06400 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.52■□□□□ 0.24
RB1P06400 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.52■□□□□ 0.24
RB1P06400 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.52■□□□□ 0.24
RB1P06400 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.52■□□□□ 0.24
RB1P06400 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.52■□□□□ 0.24
RB1P06400 ECM1P1-201ENST00000604092 1279 ntBASIC16.52■□□□□ 0.24
RB1P06400 AC244157.2-201ENST00000616239 1006 ntBASIC16.52■□□□□ 0.24
RB1P06400 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
RB1P06400 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.52■□□□□ 0.24
RB1P06400 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RB1P06400 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RB1P06400 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.23
RB1P06400 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RB1P06400 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.52■□□□□ 0.23
RB1P06400 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RB1P06400 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RB1P06400 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RB1P06400 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.52■□□□□ 0.23
RB1P06400 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
RB1P06400 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RB1P06400 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
RB1P06400 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.51■□□□□ 0.23
RB1P06400 AC011477.6-201ENST00000604980 1927 ntBASIC16.51■□□□□ 0.23
RB1P06400 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.51■□□□□ 0.23
RB1P06400 KRT8P19-201ENST00000551916 1455 ntBASIC16.51■□□□□ 0.23
RB1P06400 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.51■□□□□ 0.23
RB1P06400 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.51■□□□□ 0.23
RB1P06400 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RB1P06400 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.51■□□□□ 0.23
RB1P06400 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.51■□□□□ 0.23
RB1P06400 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.51■□□□□ 0.23
RB1P06400 PRSS30P-206ENST00000641773 873 ntBASIC16.51■□□□□ 0.23
RB1P06400 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RB1P06400 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RB1P06400 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.51■□□□□ 0.23
RB1P06400 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RB1P06400 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RB1P06400 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RB1P06400 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RB1P06400 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RB1P06400 MIR648-201ENST00000385046 94 ntBASIC16.5■□□□□ 0.23
RB1P06400 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RB1P06400 AL008707.1-201ENST00000422498 534 ntBASIC16.5■□□□□ 0.23
RB1P06400 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.5■□□□□ 0.23
RB1P06400 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.5■□□□□ 0.23
RB1P06400 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
RB1P06400 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.5■□□□□ 0.23
RB1P06400 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.5■□□□□ 0.23
RB1P06400 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.5■□□□□ 0.23
RB1P06400 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms