Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHGBP05060 AC138969.3-201ENST00000546612 1459 ntBASIC18.84■□□□□ 0.61
CHGBP05060 AC138932.2-201ENST00000548268 1459 ntBASIC18.84■□□□□ 0.61
CHGBP05060 AC126755.4-201ENST00000549796 1459 ntBASIC18.84■□□□□ 0.61
CHGBP05060 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 AC020658.6-201ENST00000623564 1870 ntBASIC18.84■□□□□ 0.61
CHGBP05060 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.84■□□□□ 0.61
CHGBP05060 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 RN7SL692P-201ENST00000464677 288 ntBASIC18.84■□□□□ 0.61
CHGBP05060 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 AC015910.1-201ENST00000579400 975 ntBASIC18.84■□□□□ 0.61
CHGBP05060 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 AC099568.2-201ENST00000609194 695 ntBASIC18.84■□□□□ 0.61
CHGBP05060 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.84■□□□□ 0.61
CHGBP05060 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHGBP05060 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.84■□□□□ 0.61
CHGBP05060 MST1L-201ENST00000442552 2185 ntBASIC18.83■□□□□ 0.61
CHGBP05060 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.83■□□□□ 0.61
CHGBP05060 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHGBP05060 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CHGBP05060 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.83■□□□□ 0.61
CHGBP05060 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.83■□□□□ 0.61
CHGBP05060 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.83■□□□□ 0.61
CHGBP05060 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHGBP05060 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHGBP05060 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.83■□□□□ 0.61
CHGBP05060 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.83■□□□□ 0.61
CHGBP05060 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.83■□□□□ 0.61
CHGBP05060 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.83■□□□□ 0.61
CHGBP05060 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
CHGBP05060 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHGBP05060 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.83■□□□□ 0.61
CHGBP05060 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.83■□□□□ 0.6
CHGBP05060 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.83■□□□□ 0.6
CHGBP05060 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHGBP05060 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 AC093726.1-201ENST00000608064 963 ntBASIC18.83■□□□□ 0.6
CHGBP05060 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.83■□□□□ 0.6
CHGBP05060 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHGBP05060 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.83■□□□□ 0.6
CHGBP05060 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.83■□□□□ 0.6
CHGBP05060 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHGBP05060 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHGBP05060 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.83■□□□□ 0.6
CHGBP05060 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHGBP05060 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.82■□□□□ 0.6
CHGBP05060 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHGBP05060 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 AL359258.3-201ENST00000622910 2331 ntBASIC18.82■□□□□ 0.6
CHGBP05060 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.82■□□□□ 0.6
CHGBP05060 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.82■□□□□ 0.6
CHGBP05060 AC092552.1-201ENST00000547243 906 ntBASIC18.82■□□□□ 0.6
CHGBP05060 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.82■□□□□ 0.6
CHGBP05060 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHGBP05060 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.82■□□□□ 0.6
CHGBP05060 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.82■□□□□ 0.6
CHGBP05060 AC000095.1-201ENST00000603208 874 ntBASIC18.82■□□□□ 0.6
CHGBP05060 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms