Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 AZGP1P1-201ENST00000411909 902 ntBASIC16.56■□□□□ 0.24
APOEP02649 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.56■□□□□ 0.24
APOEP02649 AC009477.1-201ENST00000452936 217 ntBASIC16.56■□□□□ 0.24
APOEP02649 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 ZNF890P-202ENST00000530367 1156 ntBASIC16.56■□□□□ 0.24
APOEP02649 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.56■□□□□ 0.24
APOEP02649 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
APOEP02649 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.56■□□□□ 0.24
APOEP02649 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
APOEP02649 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.56■□□□□ 0.24
APOEP02649 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.55■□□□□ 0.24
APOEP02649 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
APOEP02649 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.55■□□□□ 0.24
APOEP02649 HIST3H2BA-201ENST00000436555 524 ntBASIC16.55■□□□□ 0.24
APOEP02649 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.55■□□□□ 0.24
APOEP02649 SDHAP3-202ENST00000515467 728 ntBASIC16.55■□□□□ 0.24
APOEP02649 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.55■□□□□ 0.24
APOEP02649 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.55■□□□□ 0.24
APOEP02649 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.55■□□□□ 0.24
APOEP02649 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.55■□□□□ 0.24
APOEP02649 AL450472.2-201ENST00000603663 1156 ntBASIC16.55■□□□□ 0.24
APOEP02649 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.55■□□□□ 0.24
APOEP02649 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 AC126177.1-201ENST00000547829 2218 ntBASIC16.55■□□□□ 0.24
APOEP02649 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
APOEP02649 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
APOEP02649 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 PRAL-201ENST00000624952 3286 ntBASIC16.55■□□□□ 0.24
APOEP02649 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOEP02649 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.54■□□□□ 0.24
APOEP02649 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.54■□□□□ 0.24
APOEP02649 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.54■□□□□ 0.24
APOEP02649 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.54■□□□□ 0.24
APOEP02649 AC103702.1-201ENST00000548801 2630 ntBASIC16.54■□□□□ 0.24
APOEP02649 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
APOEP02649 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
APOEP02649 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.54■□□□□ 0.24
APOEP02649 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOEP02649 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
APOEP02649 FAM8A3P-201ENST00000427218 844 ntBASIC16.54■□□□□ 0.24
APOEP02649 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms