Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TIMP1P01033 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
TIMP1P01033 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TIMP1P01033 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.77■□□□□ 0.28
TIMP1P01033 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TIMP1P01033 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.77■□□□□ 0.28
TIMP1P01033 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 AC104784.1-201ENST00000473096 294 ntBASIC16.77■□□□□ 0.28
TIMP1P01033 AC004066.1-201ENST00000502488 802 ntBASIC16.77■□□□□ 0.28
TIMP1P01033 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.77■□□□□ 0.28
TIMP1P01033 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.77■□□□□ 0.28
TIMP1P01033 MIR4750-201ENST00000584564 56 ntBASIC16.77■□□□□ 0.28
TIMP1P01033 BNIP3P13-201ENST00000599968 566 ntBASIC16.77■□□□□ 0.28
TIMP1P01033 AF254983.2-201ENST00000612331 135 ntBASIC16.77■□□□□ 0.28
TIMP1P01033 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIMP1P01033 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TIMP1P01033 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TIMP1P01033 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMP1P01033 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMP1P01033 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.77■□□□□ 0.27
TIMP1P01033 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.77■□□□□ 0.27
TIMP1P01033 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.77■□□□□ 0.27
TIMP1P01033 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMP1P01033 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
TIMP1P01033 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIMP1P01033 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.77■□□□□ 0.27
TIMP1P01033 AC007787.1-201ENST00000588095 1583 ntBASIC16.77■□□□□ 0.27
TIMP1P01033 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMP1P01033 EIF3FP3-201ENST00000434851 1086 ntBASIC16.76■□□□□ 0.27
TIMP1P01033 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMP1P01033 AC234782.1-201ENST00000451950 919 ntBASIC16.76■□□□□ 0.27
TIMP1P01033 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.76■□□□□ 0.27
TIMP1P01033 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 RN7SL555P-201ENST00000584742 339 ntBASIC16.76■□□□□ 0.27
TIMP1P01033 AL805961.1-203ENST00000641078 1258 ntBASIC16.76■□□□□ 0.27
TIMP1P01033 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMP1P01033 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMP1P01033 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMP1P01033 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMP1P01033 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TIMP1P01033 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms