Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
TOP3BO95985 AC022532.1-201ENST00000624563 1728 ntBASIC16.22■□□□□ 0.19
TOP3BO95985 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.21■□□□□ 0.19
TOP3BO95985 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.21■□□□□ 0.19
TOP3BO95985 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 AC098614.1-201ENST00000368528 745 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 AL512384.1-201ENST00000406683 331 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 GNAQP1-201ENST00000444815 1067 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 RN7SL752P-201ENST00000463779 287 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.21■□□□□ 0.19
TOP3BO95985 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TOP3BO95985 AC009407.1-201ENST00000568958 598 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 MIR4525-201ENST00000580000 75 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.21■□□□□ 0.19
TOP3BO95985 AL031055.1-201ENST00000606362 631 ntBASIC16.21■□□□□ 0.19
TOP3BO95985 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TOP3BO95985 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TOP3BO95985 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
TOP3BO95985 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TOP3BO95985 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TOP3BO95985 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
TOP3BO95985 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TOP3BO95985 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TOP3BO95985 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TOP3BO95985 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 MIR346-201ENST00000362234 95 ntBASIC16.2■□□□□ 0.18
TOP3BO95985 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.2■□□□□ 0.18
TOP3BO95985 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.2■□□□□ 0.18
TOP3BO95985 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.2■□□□□ 0.18
TOP3BO95985 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 RAB43P1-201ENST00000561790 589 ntBASIC16.2■□□□□ 0.18
TOP3BO95985 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TOP3BO95985 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 AC003101.2-201ENST00000612557 442 ntBASIC16.2■□□□□ 0.18
TOP3BO95985 SPTSSB-204ENST00000617024 1292 ntBASIC16.2■□□□□ 0.18
TOP3BO95985 AC008267.7-201ENST00000624570 1194 ntBASIC16.2■□□□□ 0.18
TOP3BO95985 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.2■□□□□ 0.18
TOP3BO95985 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.2■□□□□ 0.18
TOP3BO95985 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOP3BO95985 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.19■□□□□ 0.18
TOP3BO95985 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOP3BO95985 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TOP3BO95985 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOP3BO95985 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOP3BO95985 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.19■□□□□ 0.18
TOP3BO95985 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.19■□□□□ 0.18
TOP3BO95985 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOP3BO95985 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms