Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.64■□□□□ 0.41
GGPS1O95749 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 KRT43P-201ENST00000434019 910 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 RPS2P32-201ENST00000439199 892 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 MIR4313-201ENST00000580760 101 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GGPS1O95749 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GGPS1O95749 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GGPS1O95749 AC007950.2-201ENST00000615045 2347 ntBASIC17.64■□□□□ 0.41
GGPS1O95749 CICP6-201ENST00000457191 2729 ntBASIC17.63■□□□□ 0.41
GGPS1O95749 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GGPS1O95749 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.63■□□□□ 0.41
GGPS1O95749 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 AC069224.1-201ENST00000566372 1715 ntBASIC17.63■□□□□ 0.41
GGPS1O95749 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
GGPS1O95749 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.63■□□□□ 0.41
GGPS1O95749 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GGPS1O95749 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GGPS1O95749 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GGPS1O95749 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.62■□□□□ 0.41
GGPS1O95749 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 ANKRD19P-201ENST00000338192 862 ntBASIC17.62■□□□□ 0.41
GGPS1O95749 BOLA2P3-201ENST00000404566 256 ntBASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.62■□□□□ 0.41
GGPS1O95749 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.62■□□□□ 0.41
GGPS1O95749 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms