Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.27□□□□□ -0.28
ABCA1O95477 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
ABCA1O95477 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.27□□□□□ -0.28
ABCA1O95477 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.27□□□□□ -0.28
ABCA1O95477 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.27□□□□□ -0.28
ABCA1O95477 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 AL162726.2-201ENST00000438986 1017 ntBASIC13.27□□□□□ -0.28
ABCA1O95477 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.27□□□□□ -0.28
ABCA1O95477 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ABCA1O95477 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA1O95477 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ABCA1O95477 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 GGT4P-201ENST00000623672 1708 ntBASIC13.27□□□□□ -0.29
ABCA1O95477 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ABCA1O95477 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
ABCA1O95477 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.27□□□□□ -0.29
ABCA1O95477 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 ZNF767P-206ENST00000513792 565 ntBASIC13.27□□□□□ -0.29
ABCA1O95477 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.27□□□□□ -0.29
ABCA1O95477 AC025048.3-201ENST00000590609 569 ntBASIC13.27□□□□□ -0.29
ABCA1O95477 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.27□□□□□ -0.29
ABCA1O95477 AC084346.2-201ENST00000607097 949 ntBASIC13.27□□□□□ -0.29
ABCA1O95477 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.27□□□□□ -0.29
ABCA1O95477 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.27□□□□□ -0.29
ABCA1O95477 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ABCA1O95477 AC005702.4-201ENST00000618393 416 ntBASIC13.27□□□□□ -0.29
ABCA1O95477 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ABCA1O95477 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 FAM21FP-201ENST00000426241 1131 ntBASIC13.26□□□□□ -0.29
ABCA1O95477 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 AC108725.1-201ENST00000495472 409 ntBASIC13.26□□□□□ -0.29
ABCA1O95477 RNA5SP412-201ENST00000516234 123 ntBASIC13.26□□□□□ -0.29
ABCA1O95477 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.26□□□□□ -0.29
ABCA1O95477 CU634019.7-201ENST00000624153 1185 ntBASIC13.26□□□□□ -0.29
ABCA1O95477 FP236241.2-201ENST00000624906 1185 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 399.6 ms