Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPS9P1-201ENST00000419943 583 ntBASIC23.09■■□□□ 1.29
RAPGEF3O95398 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 IGHV3-37-201ENST00000518544 340 ntBASIC23.09■■□□□ 1.29
RAPGEF3O95398 AL132994.2-201ENST00000603120 687 ntBASIC23.09■■□□□ 1.29
RAPGEF3O95398 AL358472.3-201ENST00000608147 415 ntBASIC23.09■■□□□ 1.29
RAPGEF3O95398 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 FLII-221ENST00000578558 2377 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF3O95398 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF3O95398 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.09■■□□□ 1.29
RAPGEF3O95398 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RAPGEF3O95398 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 PIN4P1-201ENST00000451079 396 ntBASIC23.08■■□□□ 1.29
RAPGEF3O95398 AC010234.1-201ENST00000494599 870 ntBASIC23.08■■□□□ 1.29
RAPGEF3O95398 RCC2P8-201ENST00000502779 1035 ntBASIC23.08■■□□□ 1.29
RAPGEF3O95398 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AL136295.7-201ENST00000619226 1200 ntBASIC23.08■■□□□ 1.29
RAPGEF3O95398 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC23.08■■□□□ 1.29
RAPGEF3O95398 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAPGEF3O95398 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF3O95398 AL133373.2-201ENST00000623187 2828 ntBASIC23.08■■□□□ 1.28
RAPGEF3O95398 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF3O95398 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF3O95398 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.08■■□□□ 1.28
RAPGEF3O95398 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC23.08■■□□□ 1.28
RAPGEF3O95398 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF3O95398 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 RPL7P35-201ENST00000446943 740 ntBASIC23.07■■□□□ 1.28
RAPGEF3O95398 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 AP002803.1-201ENST00000528836 498 ntBASIC23.07■■□□□ 1.28
RAPGEF3O95398 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC23.07■■□□□ 1.28
RAPGEF3O95398 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF3O95398 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 AC018695.7-201ENST00000624587 2492 ntBASIC23.06■■□□□ 1.28
RAPGEF3O95398 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 AC009779.1-201ENST00000551138 283 ntBASIC23.06■■□□□ 1.28
RAPGEF3O95398 AC100827.2-201ENST00000563214 1194 ntBASIC23.06■■□□□ 1.28
RAPGEF3O95398 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 RPL35-206ENST00000629845 340 ntTSL 5 BASIC23.06■■□□□ 1.28
RAPGEF3O95398 NAP1L6-202ENST00000641404 1222 ntBASIC23.06■■□□□ 1.28
RAPGEF3O95398 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF3O95398 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms