Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTN3O95197 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RTN3O95197 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTN3O95197 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN3O95197 NFIC-211ENST00000641145 8399 ntBASIC16.64■□□□□ 0.25
RTN3O95197 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN3O95197 AC074338.1-201ENST00000416825 156 ntBASIC16.64■□□□□ 0.25
RTN3O95197 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RTN3O95197 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTN3O95197 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.64■□□□□ 0.25
RTN3O95197 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.64■□□□□ 0.25
RTN3O95197 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RTN3O95197 RARRES2P5-201ENST00000564013 466 ntBASIC16.64■□□□□ 0.25
RTN3O95197 AC012645.4-201ENST00000610691 1061 ntBASIC16.64■□□□□ 0.25
RTN3O95197 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTN3O95197 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN3O95197 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.64■□□□□ 0.25
RTN3O95197 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RTN3O95197 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.63■□□□□ 0.25
RTN3O95197 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 CICP4-201ENST00000447359 2812 ntBASIC16.63■□□□□ 0.25
RTN3O95197 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.63■□□□□ 0.25
RTN3O95197 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 AC069224.1-201ENST00000566372 1715 ntBASIC16.63■□□□□ 0.25
RTN3O95197 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 RN7SL692P-201ENST00000464677 288 ntBASIC16.63■□□□□ 0.25
RTN3O95197 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 SLED1-202ENST00000512051 380 ntBASIC16.63■□□□□ 0.25
RTN3O95197 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 AL596325.1-201ENST00000563991 1082 ntBASIC16.63■□□□□ 0.25
RTN3O95197 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.63■□□□□ 0.25
RTN3O95197 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RTN3O95197 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 AC097359.3-201ENST00000603982 1210 ntBASIC16.63■□□□□ 0.25
RTN3O95197 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.63■□□□□ 0.25
RTN3O95197 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.63■□□□□ 0.25
RTN3O95197 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 CICP13-201ENST00000422015 2789 ntBASIC16.63■□□□□ 0.25
RTN3O95197 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTN3O95197 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTN3O95197 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTN3O95197 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.62■□□□□ 0.25
RTN3O95197 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms