Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
KDM4BO94953 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.96□□□□□ -0.18
KDM4BO94953 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.96□□□□□ -0.18
KDM4BO94953 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.96□□□□□ -0.18
KDM4BO94953 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KDM4BO94953 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 MRPL3P1-201ENST00000400109 1033 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 RNA5SP415-201ENST00000517246 115 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 IGHV3-22-201ENST00000520721 359 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 AL662844.1-201ENST00000546340 181 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.95□□□□□ -0.18
KDM4BO94953 AC096734.2-201ENST00000562054 433 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 AP001005.1-201ENST00000571755 1248 ntBASIC13.95□□□□□ -0.18
KDM4BO94953 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.95□□□□□ -0.18
KDM4BO94953 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
KDM4BO94953 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.95□□□□□ -0.18
KDM4BO94953 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.95□□□□□ -0.18
KDM4BO94953 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.95□□□□□ -0.18
KDM4BO94953 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KDM4BO94953 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.94□□□□□ -0.18
KDM4BO94953 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 RHOQP3-201ENST00000437982 621 ntBASIC13.94□□□□□ -0.18
KDM4BO94953 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDM4BO94953 AC109635.5-201ENST00000533593 962 ntBASIC13.94□□□□□ -0.18
KDM4BO94953 KRT126P-201ENST00000549467 1181 ntBASIC13.94□□□□□ -0.18
KDM4BO94953 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.94□□□□□ -0.18
KDM4BO94953 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.94□□□□□ -0.18
KDM4BO94953 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.94□□□□□ -0.18
KDM4BO94953 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms