Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL5O76039 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL5O76039 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDKL5O76039 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CDKL5O76039 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CDKL5O76039 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 AC009090.5-201ENST00000624886 2285 ntBASIC18.33■□□□□ 0.53
CDKL5O76039 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL5O76039 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL5O76039 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL5O76039 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 TSPY26P-202ENST00000565928 3884 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL5O76039 SLED1-202ENST00000512051 380 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.33■□□□□ 0.52
CDKL5O76039 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 AC025048.3-201ENST00000590609 569 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 AL158211.3-201ENST00000607385 239 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 AC005702.4-201ENST00000618393 416 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL5O76039 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL5O76039 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL5O76039 AC013268.4-201ENST00000637413 2228 ntBASIC18.33■□□□□ 0.52
CDKL5O76039 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL5O76039 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL5O76039 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL5O76039 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 METTL21AP1-201ENST00000438852 635 ntBASIC18.32■□□□□ 0.52
CDKL5O76039 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL5O76039 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.32■□□□□ 0.52
CDKL5O76039 AC027369.6-201ENST00000525520 931 ntBASIC18.32■□□□□ 0.52
CDKL5O76039 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.32■□□□□ 0.52
CDKL5O76039 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL5O76039 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL5O76039 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL5O76039 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
CDKL5O76039 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL5O76039 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms