Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 AC087641.1-201ENST00000557561 1021 ntBASIC13.77□□□□□ -0.21
UPK1BO75841 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 Z83836.1-201ENST00000624605 1642 ntBASIC13.77□□□□□ -0.21
UPK1BO75841 AC134407.2-201ENST00000625089 1978 ntBASIC13.77□□□□□ -0.21
UPK1BO75841 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UPK1BO75841 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UPK1BO75841 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
UPK1BO75841 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 SPDYE21P-201ENST00000413323 827 ntBASIC13.76□□□□□ -0.21
UPK1BO75841 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.76□□□□□ -0.21
UPK1BO75841 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK1BO75841 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK1BO75841 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.76□□□□□ -0.21
UPK1BO75841 GUSBP12-201ENST00000513727 720 ntBASIC13.76□□□□□ -0.21
UPK1BO75841 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 AC011467.2-201ENST00000598425 242 ntBASIC13.76□□□□□ -0.21
UPK1BO75841 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 AL353135.1-201ENST00000606729 504 ntBASIC13.76□□□□□ -0.21
UPK1BO75841 FAM87A-204ENST00000613235 858 ntBASIC13.76□□□□□ -0.21
UPK1BO75841 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UPK1BO75841 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UPK1BO75841 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1BO75841 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1BO75841 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK1BO75841 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1BO75841 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.75□□□□□ -0.21
UPK1BO75841 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
UPK1BO75841 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 MIR1238-201ENST00000408483 83 ntBASIC13.75□□□□□ -0.21
UPK1BO75841 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms