Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 LINC02012-201ENST00000608206 1725 ntBASIC6.85□□□□□ -1.31
USH2AO75445 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USH2AO75445 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC6.85□□□□□ -1.31
USH2AO75445 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 MIR4522-201ENST00000584932 87 ntBASIC6.85□□□□□ -1.31
USH2AO75445 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
USH2AO75445 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC6.84□□□□□ -1.31
USH2AO75445 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
USH2AO75445 AL359258.3-201ENST00000622910 2331 ntBASIC6.84□□□□□ -1.31
USH2AO75445 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 NCR3-202ENST00000376071 541 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 GCSHP3-201ENST00000431120 391 ntBASIC6.84□□□□□ -1.31
USH2AO75445 AC130709.1-201ENST00000484779 1212 ntBASIC6.84□□□□□ -1.31
USH2AO75445 BCL2L12P1-201ENST00000508390 733 ntBASIC6.84□□□□□ -1.31
USH2AO75445 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 AC004466.2-201ENST00000614749 516 ntBASIC6.84□□□□□ -1.31
USH2AO75445 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC6.84□□□□□ -1.31
USH2AO75445 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms