Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRCH4O75427 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.39■□□□□ 0.21
LRCH4O75427 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH4O75427 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH4O75427 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.39■□□□□ 0.21
LRCH4O75427 AC067863.1-201ENST00000494933 530 ntBASIC16.39■□□□□ 0.21
LRCH4O75427 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 SLED1-202ENST00000512051 380 ntBASIC16.39■□□□□ 0.21
LRCH4O75427 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.39■□□□□ 0.21
LRCH4O75427 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.39■□□□□ 0.21
LRCH4O75427 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRCH4O75427 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LRCH4O75427 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.38■□□□□ 0.21
LRCH4O75427 METTL21AP1-201ENST00000438852 635 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 RPL13P2-201ENST00000440687 659 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 FAM86GP-201ENST00000448322 971 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 RN7SL618P-201ENST00000477850 296 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 AC027369.6-201ENST00000525520 931 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 AL158211.3-201ENST00000607385 239 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 AC126365.1-201ENST00000578585 1514 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 KRT18P28-201ENST00000453838 1332 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCH4O75427 AC084364.1-201ENST00000551967 1556 ntBASIC16.38■□□□□ 0.21
LRCH4O75427 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LRCH4O75427 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRCH4O75427 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH4O75427 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH4O75427 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LRCH4O75427 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH4O75427 TREML5P-201ENST00000421694 576 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH4O75427 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH4O75427 AC097493.3-201ENST00000509725 367 ntBASIC16.37■□□□□ 0.21
LRCH4O75427 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH4O75427 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms