Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 PHKG1P2-201ENST00000457537 863 ntBASIC14.84□□□□□ -0.03
PRAMEF2O60811 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 AL596325.1-201ENST00000563991 1082 ntBASIC14.84□□□□□ -0.03
PRAMEF2O60811 AL132655.2-201ENST00000596276 594 ntBASIC14.84□□□□□ -0.03
PRAMEF2O60811 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 AC007950.2-201ENST00000615045 2347 ntBASIC14.84□□□□□ -0.03
PRAMEF2O60811 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PRAMEF2O60811 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRAMEF2O60811 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
PRAMEF2O60811 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF2O60811 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF2O60811 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PRAMEF2O60811 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.83□□□□□ -0.03
PRAMEF2O60811 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 GK-202ENST00000378941 458 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 AL353779.1-201ENST00000434793 351 ntBASIC14.83□□□□□ -0.04
PRAMEF2O60811 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 AC010336.2-201ENST00000564226 506 ntBASIC14.83□□□□□ -0.04
PRAMEF2O60811 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 MIR6069-201ENST00000620069 79 ntBASIC14.83□□□□□ -0.04
PRAMEF2O60811 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PRAMEF2O60811 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.83□□□□□ -0.04
PRAMEF2O60811 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PRAMEF2O60811 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PRAMEF2O60811 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms