Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 AC108725.1-201ENST00000495472 409 ntBASIC20.01■□□□□ 0.79
KCNQ3O43525 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.01■□□□□ 0.79
KCNQ3O43525 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNQ3O43525 AP005019.2-201ENST00000615104 511 ntBASIC20.01■□□□□ 0.79
KCNQ3O43525 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.01■□□□□ 0.79
KCNQ3O43525 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNQ3O43525 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 PRAL-201ENST00000624952 3286 ntBASIC20■□□□□ 0.79
KCNQ3O43525 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
KCNQ3O43525 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20■□□□□ 0.79
KCNQ3O43525 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 AL590640.2-201ENST00000457038 527 ntBASIC20■□□□□ 0.79
KCNQ3O43525 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20■□□□□ 0.79
KCNQ3O43525 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20■□□□□ 0.79
KCNQ3O43525 MIR4525-201ENST00000580000 75 ntBASIC20■□□□□ 0.79
KCNQ3O43525 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 MIR6869-201ENST00000619434 62 ntBASIC20■□□□□ 0.79
KCNQ3O43525 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 RHOXF1P1-202ENST00000635473 501 ntBASIC20■□□□□ 0.79
KCNQ3O43525 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20■□□□□ 0.79
KCNQ3O43525 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 TUBB1P2-201ENST00000422712 1306 ntBASIC20■□□□□ 0.79
KCNQ3O43525 TUBB1P1-201ENST00000503144 1300 ntBASIC20■□□□□ 0.79
KCNQ3O43525 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
KCNQ3O43525 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNQ3O43525 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.99■□□□□ 0.79
KCNQ3O43525 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.99■□□□□ 0.79
KCNQ3O43525 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.99■□□□□ 0.79
KCNQ3O43525 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.99■□□□□ 0.79
KCNQ3O43525 RPL13AP20-201ENST00000459725 609 ntBASIC19.99■□□□□ 0.79
KCNQ3O43525 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.99■□□□□ 0.79
KCNQ3O43525 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.99■□□□□ 0.79
KCNQ3O43525 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KCNQ3O43525 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.99■□□□□ 0.79
KCNQ3O43525 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.99■□□□□ 0.79
KCNQ3O43525 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.99■□□□□ 0.79
KCNQ3O43525 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KCNQ3O43525 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.98■□□□□ 0.79
KCNQ3O43525 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
KCNQ3O43525 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KCNQ3O43525 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
KCNQ3O43525 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.98■□□□□ 0.79
KCNQ3O43525 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.98■□□□□ 0.79
KCNQ3O43525 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.98■□□□□ 0.79
KCNQ3O43525 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.98■□□□□ 0.79
KCNQ3O43525 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.98■□□□□ 0.79
KCNQ3O43525 BX539320.1-201ENST00000623759 877 ntBASIC19.98■□□□□ 0.79
KCNQ3O43525 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.98■□□□□ 0.79
KCNQ3O43525 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.98■□□□□ 0.79
KCNQ3O43525 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms