Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS4O43181 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.11■□□□□ 0.01
NDUFS4O43181 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS4O43181 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.11■□□□□ 0.01
NDUFS4O43181 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS4O43181 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.11■□□□□ 0.01
NDUFS4O43181 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS4O43181 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS4O43181 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS4O43181 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS4O43181 AC074044.1-201ENST00000609673 707 ntBASIC15.11■□□□□ 0.01
NDUFS4O43181 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 AC020658.6-201ENST00000623564 1870 ntBASIC15.11■□□□□ 0.01
NDUFS4O43181 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NDUFS4O43181 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS4O43181 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NDUFS4O43181 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS4O43181 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS4O43181 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS4O43181 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 Z97205.2-201ENST00000564697 1639 ntBASIC15.1■□□□□ 0.01
NDUFS4O43181 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 ZNF890P-202ENST00000530367 1156 ntBASIC15.1■□□□□ 0.01
NDUFS4O43181 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 AC011467.4-201ENST00000594891 528 ntBASIC15.1■□□□□ 0.01
NDUFS4O43181 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.1■□□□□ 0.01
NDUFS4O43181 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.1■□□□□ 0.01
NDUFS4O43181 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NDUFS4O43181 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS4O43181 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS4O43181 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NDUFS4O43181 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFS4O43181 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFS4O43181 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFS4O43181 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFS4O43181 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.09■□□□□ 0.01
NDUFS4O43181 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.09■□□□□ 0.01
NDUFS4O43181 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFS4O43181 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.09■□□□□ 0.01
NDUFS4O43181 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms