Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CHD1O14646 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CHD1O14646 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CHD1O14646 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC24.67■■□□□ 1.54
CHD1O14646 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CHD1O14646 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD1O14646 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 DUTP3-201ENST00000450025 415 ntBASIC24.66■■□□□ 1.54
CHD1O14646 CDC23-208ENST00000505120 455 ntTSL 3 BASIC24.66■■□□□ 1.54
CHD1O14646 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 NEU3-207ENST00000534628 746 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC24.66■■□□□ 1.54
CHD1O14646 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
CHD1O14646 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD1O14646 LINC01165-201ENST00000445190 1623 ntBASIC24.66■■□□□ 1.54
CHD1O14646 INE2-201ENST00000630399 1874 ntBASIC24.66■■□□□ 1.54
CHD1O14646 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC24.66■■□□□ 1.54
CHD1O14646 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC24.66■■□□□ 1.54
CHD1O14646 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC24.66■■□□□ 1.54
CHD1O14646 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC24.66■■□□□ 1.54
CHD1O14646 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC24.66■■□□□ 1.54
CHD1O14646 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD1O14646 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CHD1O14646 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 ABR-203ENST00000536794 2213 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD1O14646 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD1O14646 BANP-227ENST00000626016 2144 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD1O14646 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 AC011840.2-201ENST00000563063 1520 ntBASIC24.65■■□□□ 1.54
CHD1O14646 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 UROS-201ENST00000368774 744 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD1O14646 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CHD1O14646 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC24.65■■□□□ 1.54
CHD1O14646 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 AC138696.2-201ENST00000607376 223 ntBASIC24.65■■□□□ 1.54
CHD1O14646 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CHD1O14646 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC24.65■■□□□ 1.54
CHD1O14646 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHD1O14646 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHD1O14646 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD1O14646 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
CHD1O14646 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.64■■□□□ 1.54
CHD1O14646 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.64■■□□□ 1.54
CHD1O14646 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHD1O14646 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD1O14646 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC24.64■■□□□ 1.54
CHD1O14646 BCAS2P2-201ENST00000425064 674 ntBASIC24.64■■□□□ 1.54
CHD1O14646 KRT17P4-201ENST00000429445 819 ntBASIC24.64■■□□□ 1.54
CHD1O14646 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC24.64■■□□□ 1.54
CHD1O14646 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC24.64■■□□□ 1.54
CHD1O14646 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
CHD1O14646 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CHD1O14646 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC24.64■■□□□ 1.54
CHD1O14646 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC24.64■■□□□ 1.54
CHD1O14646 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHD1O14646 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CHD1O14646 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC24.64■■□□□ 1.53
CHD1O14646 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CHD1O14646 MIR4472-1-201ENST00000584349 80 ntBASIC24.64■■□□□ 1.53
CHD1O14646 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC24.64■■□□□ 1.53
CHD1O14646 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
CHD1O14646 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD1O14646 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD1O14646 AC026320.2-201ENST00000434379 478 ntBASIC24.63■■□□□ 1.53
CHD1O14646 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CHD1O14646 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CHD1O14646 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
CHD1O14646 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms