Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 RARRES2P8-201ENST00000566335 367 ntBASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 AL450472.2-201ENST00000603663 1156 ntBASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 PDPK2P-202ENST00000562415 1191 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AC034105.1-201ENST00000563488 319 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 SLC25A6P4-201ENST00000586535 553 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AC026748.1-201ENST00000624349 3251 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 AC104109.2-201ENST00000602919 1418 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 OR2I1P-210ENST00000642037 4691 ntBASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TRIM49D1C9J1S8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 RNA5SP410-201ENST00000516285 106 ntBASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AC112191.1-201ENST00000523689 701 ntBASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AC145285.3-201ENST00000564603 959 ntBASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM49D1C9J1S8 LINC00552-201ENST00000625151 2579 ntBASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms