Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC087481.3-201ENST00000602886 1894 ntBASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC068587.6-202ENST00000641839 5619 ntBASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 TMBIM7P-203ENST00000641617 1718 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 KRT18P28-201ENST00000453838 1332 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 KLF2P3-201ENST00000451977 1087 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 HLA-V-204ENST00000476601 1289 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AC051619.7-201ENST00000568314 623 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 AL138828.2-201ENST00000615812 383 ntBASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC162PA2VCL2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 FO538757.1-201ENST00000623083 1397 ntBASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 METTL21AP1-201ENST00000438852 635 ntBASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 TARDBPP1-201ENST00000442013 1203 ntBASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC015911.4-201ENST00000588022 1070 ntBASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC162PA2VCL2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms