Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC2Q9Y5Z7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 RNU1-114P-201ENST00000365297 166 ntBASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AL354989.2-201ENST00000435838 1540 ntBASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AC018735.1-201ENST00000437208 1502 ntBASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC2Q9Y5Z7 AC018695.7-201ENST00000624587 2492 ntBASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 MIR648-201ENST00000385046 94 ntBASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 HIST2H2BC-201ENST00000498492 580 ntBASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 RN7SL48P-201ENST00000579283 293 ntBASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HCFC2Q9Y5Z7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 MIR663B-201ENST00000408361 115 ntBASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 CNN2P10-201ENST00000443067 918 ntBASIC16.3■□□□□ 0.2
HCFC2Q9Y5Z7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms