Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 AC112504.1-201ENST00000623415 1841 ntBASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 SUPT4H1P2-201ENST00000501248 353 ntBASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 PRKXP1-201ENST00000561423 1122 ntBASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 YRDCP1-201ENST00000621419 643 ntBASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 AC004899.1-201ENST00000424687 1714 ntBASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDC42BPBQ9Y5S2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 MPRIPP1-201ENST00000452433 1089 ntBASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 AL023803.2-201ENST00000620080 638 ntBASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 PCDHA12-202ENST00000613593 2588 ntBASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.22■■□□□ 1.31
CDC42BPBQ9Y5S2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 CEP164P1-201ENST00000455142 418 ntBASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 AP003419.4-201ENST00000616071 517 ntBASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CDC42BPBQ9Y5S2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
CDC42BPBQ9Y5S2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC23.2■■□□□ 1.31
CDC42BPBQ9Y5S2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CDC42BPBQ9Y5S2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CDC42BPBQ9Y5S2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 RPL17P11-201ENST00000417593 544 ntBASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDC42BPBQ9Y5S2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC23.19■■□□□ 1.3
CDC42BPBQ9Y5S2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDC42BPBQ9Y5S2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms