Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KRT8P37-201ENST00000451609 1420 ntBASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 MIR658-201ENST00000385210 100 ntBASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AP005482.1-201ENST00000563722 1273 ntBASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX2IPQ9Y2D8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AL442647.2-201ENST00000429864 857 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 KRT43P-201ENST00000434019 910 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AC022210.1-201ENST00000449856 793 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 LINC02199-201ENST00000506655 2702 ntBASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms